BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016H07SP1|AL427084
(950 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 1197 0.0
3x_Contig1530 1030 0.0
>3x_Contig1461
Length = 5478
Score = 1197 bits (603), Expect = 0.0
Identities = 730/752 (97%), Gaps = 17/752 (2%)
Strand = Plus / Plus
Query: 155 aaaactgat-agcagaaaatcaagaattagccgcgcaattaagcgcaggccatattcagc 213
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 aaaactgattagcagaaaatcaagaattagccgcgcaattaagcgcaggccatattcagc 208
Query: 214 gattcccccagtaatctactcattcataatctttaatgatccttccgca-gttcacctac 272
|||||||||||| ||||||||||| || ||| |||||||||| |||||| ||||| ||||
Sbjct: 209 gattcccccagt-atctactcatt-at-atc-ttaatgatcc-tccgcaggttca-ctac 262
Query: 273 ggaaaccttgttacgacttttagttcctctaaatgaccaa-gtttgaccagattcttcgc 331
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 263 ggaaaccttgttacgacttttagttcctctaaatgaccaatgtttgaccagattcttcgc 322
Query: 332 tctgagatggagttgcccccttctctaagcaaatcctgaggcctcactaagccattcaat 391
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 323 tctgagatggagttgcccccttccctaagcaaatcctgaggcctcactaagccattcaat 382
Query: 392 cggtactagcgacgggcggtgtgtacaaagggcagggacgtaatcaacgcaagctgatga 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cggtactagcgacgggcggtgtgtacaaagggcagggacgtaatcaacgcaagctgatga 442
Query: 452 cttgcgcttactaggaattcctcgttgaagagcaataattacaatgctctatccccagca 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cttgcgcttactaggaattcctcgttgaagagcaataattacaatgctctatccccagca 502
Query: 512 cgacggagtttcacaagattacccagacctctcggccaaggttgtactcgctggctccgt 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cgacggagtttcacaagattacccagacctctcggccaaggttgtactcgctggctccgt 562
Query: 572 cagtgtagcgcgcgtgcggcccagaacgtctaagggcatcacagacctgttattgcctca 631
|| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cacagtagcgtgcgtgcggcccagaacgtctaagggcatcacagacctgttattgcctca 622
Query: 632 aacttc-catcgg-cttgaaaccgatagtcc-ctctaagaagagtcaaccggcaagtgcc 688
|||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 623 aacttctcatcggtcttgaaaccgatagtcctctctaagaagagtcaaccggcaagtgcc 682
Query: 689 agcaaccctatttagtaggttaaggtctcgttcgttatcgcaattaagcagacaaatcac 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 agcaaccctatttagtaggttaaggtctcgttcgttatcgcaattaagcagacaaatcac 742
Query: 749 tccaccaactaagaacggccatgcaccaccacccacaaaatcaagaaagagctctcaatc 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tccaccaactaagaacggccatgcaccaccacccacaaaatcaagaaagagctctcaatc 802
Query: 809 tgtcaatccttattgtgtctggacctggtgagttt-cccgtgttgagtcaaattarg-cg 866
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||
Sbjct: 803 tgtcaatccttattgtgtctggacctggtgagtttccccgtgttgagtcaaattaagccg 862
Query: 867 cagg--ccactcctggtggtg-ccttccgtca 895
|||| ||||||||||||||| ||||||||||
Sbjct: 863 caggctccactcctggtggtgcccttccgtca 894
>3x_Contig1530
Length = 6216
Score = 1030 bits (519), Expect = 0.0
Identities = 807/896 (90%), Gaps = 7/896 (0%)
Strand = Plus / Minus
Query: 6 gttgttgaaagttttgaatattaaatttcttgataaatagtttttcataatgcaaaatgt 65
|||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 1679 gttgttgaaagttttgaatattaaatttattgataaatagtttttgataatgcaaaatgt 1620
Query: 66 tgtttgtgtttatgtccactggagagacgagctctccagggaagtagttcatagagaaaa 125
||||||||||||||| |||||||||| ||||| | |||||||||||| ||||||||||
Sbjct: 1619 tgtttgtgtttatgttaactggagagaagagctttttagggaagtagtttatagagaaaa 1560
Query: 126 aactccattgtgtttaggatgagagaaagaaaactgatagcagaaaatcaagaattagcc 185
|| | ||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 1559 aaatttattgtgtttaggatgagagaaagaaaattgatagcagaaaattaagaattagcc 1500
Query: 186 gcgcaattaagcgcaggccatattcagcgattcccccagtaatctactcattcataatct 245
|||||||||||||||||| ||||| |||||||||||||||||| |||| ||| ||||| |
Sbjct: 1499 gcgcaattaagcgcaggcgatatttagcgattcccccagtaatttacttatttataatat 1440
Query: 246 ttaatgatccttccgcag-ttcacctacggaaaccttgttacgacttttagttcctctaa 304
|||||||| |||||||| ||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 1439 ttaatgatagttccgcaggttcac-tacggaaaccttgttacgaattttagttcctctaa 1381
Query: 305 atgaccaagtttgaccagattcttcgctctgagatggagttgcccccttctctaagcaaa 364
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1380 atgaccaagtttgaccagatttttcgctctgagatggagttgcccccttctctaagcaaa 1321
Query: 365 tcctgaggcctcactaagccattcaatcggtactagcgacgggcggtgtgtacaaagggc 424
| |||||| ||| ||||| ||| ||| |||| |||||| |||||||||||| ||||||
Sbjct: 1320 tagtgaggcgtcaataagcgattaaataggtaatagcgaagggcggtgtgtaaaaaggga 1261
Query: 425 agggacgtaatcaacgcaagctgatgacttgcgcttactaggaattcctcgttgaagagc 484
||||| ||||| || |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1260 agggaagtaataaaagcaagctgatgaattgcgcttactaggaattcctcgttgaagagc 1201
Query: 485 aataattacaatgctctatccccagcacgacggagtttcacaagattacccagacctctc 544
||||||||||||||||||| |||||||| ||||||| | ||||||| ||| | |
Sbjct: 1200 aataattacaatgctctattttcagcacgaaggagttttaaaagattaaatagaattttt 1141
Query: 545 ggccaaggttgtactcgctggctccgtcagtgtagcgcgcgtgcggcccagaacgtctaa 604
||| ||||||||||| |||||||| || ||||||||||||||| ||| |||||||| |||
Sbjct: 1140 ggctaaggttgtacttgctggctctgttagtgtagcgcgcgtggggcacagaacgtttaa 1081
Query: 605 gggcatcacagacctgttattgcctcaaacttccatcggcttgaaaccgatagtccctct 664
|||||| | ||| ||||||||| | ||| || || ||||||||| |||||| | |
Sbjct: 1080 gggcattatagatgtgttattgctttaaaattttattggcttgaaaatgatagtattttt 1021
Query: 665 aagaagagtcaaccggcaagtgccagcaaccctatttagtaggttaaggtctcgttcgtt 724
||||||||| ||| || |||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 1020 aagaagagttaactgggaagtgctagcaactttatttagtaggttaaggtctcgttcgtt 961
Query: 725 atcgcaattaagcagacaaatcactccaccaactaagaacggccatgcaccaccacccac 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 atcgcaattaagcagacaaatcactccaccaactaagaacggccatgcaccaccacccac 901
Query: 785 aaaatcaagaaagagctctcaatctgtcaatccttattgtgtctggacctggtgagttt- 843
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 aaaatcaagaaagagctctcaatctgtcaatccttattgtgtctggacctggtgagtttc 841
Query: 844 cccgtgttgagtcaaattarg-cgcagg--ccactcctggtggtg-ccttccgtca 895
||||||||||||||||||| | |||||| ||||||||||||||| ||||||||||
Sbjct: 840 cccgtgttgagtcaaattaagccgcaggctccactcctggtggtgcccttccgtca 785
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5034
Number of Sequences: 1807
Number of extensions: 5034
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 2
length of query: 950
length of database: 10,358,551
effective HSP length: 16
effective length of query: 934
effective length of database: 10,329,639
effective search space: 9647882826
effective search space used: 9647882826
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)